X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP29325% PEG 3350, 250 mM magnesium chloride, 0.1 M sodium citrate, pH 5.7
Crystal Properties
Matthews coefficientSolvent content
2.5852.36

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 95.41α = 90
b = 211.25β = 91.61
c = 122.68γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 2M2017-01-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06DA1.00002SLSX06DA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.448.599.910.846.2188717
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.42.46

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.448.51179281943699.940.185930.183720.22781RANDOM46.749
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.33-0.450.27-0.58
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.515
r_dihedral_angle_3_deg15.993
r_dihedral_angle_4_deg15.937
r_long_range_B_other11.459
r_long_range_B_refined11.458
r_scangle_other9.32
r_mcangle_it7.531
r_mcangle_other7.531
r_scbond_it7.041
r_scbond_other7.037
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.515
r_dihedral_angle_3_deg15.993
r_dihedral_angle_4_deg15.937
r_long_range_B_other11.459
r_long_range_B_refined11.458
r_scangle_other9.32
r_mcangle_it7.531
r_mcangle_other7.531
r_scbond_it7.041
r_scbond_other7.037
r_mcbond_it5.643
r_mcbond_other5.643
r_dihedral_angle_1_deg5.597
r_angle_other_deg1.412
r_angle_refined_deg1.314
r_chiral_restr0.061
r_bond_refined_d0.007
r_gen_planes_refined0.006
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms29279
Nucleic Acid Atoms
Solvent Atoms1436
Heterogen Atoms501

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing