6GBE

Murine Protein Tyrosine Phosphatase PTPN13 PDZ3 Domain-PRK2 Peptide Complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1.0 mM [U-99% 13C; U-99% 15N] PDZ3/PRK290% H2O/10% D2OPBS7.41 bar298Bruker DRX 600
23D 1H-13C NOESY1.0 mM [U-99% 13C; U-99% 15N] PDZ3/PRK290% H2O/10% D2OPBS7.41 bar298Bruker DRX 600
53D HCCH-TOCSY1.0 mM [U-99% 13C; U-99% 15N] PDZ3/PRK290% H2O/10% D2OPBS7.41 bar298Bruker DRX 600
32D 1H-1H NOESY1.0 mM [U-99% 13C; U-99% 15N] PDZ3/PRK290% H2O/10% D2OPBS7.41 bar298Bruker DRX 600
42D 1H-15N HSQC0.5 mM [U-99% 15N] PDZ3/PRK290% H2O/10% D2OPBS7.41 bar298Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
simulated annealingXplor-NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number400
Conformers Submitted Total Number20
Representative Model1 (medoid)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRViewJohnson, One Moon Scientific
2peak pickingNMRViewJohnson, One Moon Scientific
3structure calculationCYANAGuntert, Mumenthaler and Wuthrich
4structure calculationXplor-NIHSchwieters, Kuszewski, Tjandra and Clore