X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.52912.2-2.4 M sodium/potassium phopsphate
Crystal Properties
Matthews coefficientSolvent content
2.1342.18

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 37.779α = 90
b = 45.47β = 90
c = 64.829γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6M2017-06-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I240.9686DiamondI24

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.764.831000.2195.35.63349
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.72.83

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4QF32.737.25316915399.970.229510.225790.29994RANDOM67.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-4.012.031.98
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg42.316
r_dihedral_angle_4_deg19.865
r_dihedral_angle_3_deg15.38
r_dihedral_angle_1_deg7.326
r_long_range_B_refined5.32
r_long_range_B_other5.319
r_scangle_other3.624
r_mcangle_it3.29
r_mcangle_other3.288
r_scbond_it2.728
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg42.316
r_dihedral_angle_4_deg19.865
r_dihedral_angle_3_deg15.38
r_dihedral_angle_1_deg7.326
r_long_range_B_refined5.32
r_long_range_B_other5.319
r_scangle_other3.624
r_mcangle_it3.29
r_mcangle_other3.288
r_scbond_it2.728
r_scbond_other2.725
r_mcbond_it2.022
r_mcbond_other2.017
r_angle_refined_deg1.73
r_angle_other_deg1.146
r_chiral_restr0.089
r_bond_refined_d0.014
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms856
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms16

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
Aimlessdata scaling
REFMACphasing