6FCE

NMR ensemble of Macrocyclic Peptidomimetic Containing Constrained a,a-dialkylated Amino Acids with Potent and Selective Activity at Human Melanocortin Receptors


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
11D 1H2.0 mM Peptide, 10 % v/v [U-99% 2H] D2O, 0.1 mM TSP, 200 mM [U-100% 2H] DPC90% H2O/10% D2O0 mM5.51 atm298Varian INOVA 700
22D 1H-1H TOCSY2.0 mM Peptide, 10 % v/v [U-99% 2H] D2O, 0.1 mM TSP, 200 mM [U-100% 2H] DPC90% H2O/10% D2O0 mM5.51 atm298Varian INOVA 700
32D 1H-1H NOESY2.0 mM Peptide, 10 % v/v [U-99% 2H] D2O, 0.1 mM TSP, 200 mM [U-100% 2H] DPC90% H2O/10% D2O0 mM5.51 atm298Varian INOVA 700
42D DQF-COSY2.0 mM Peptide, 10 % v/v [U-99% 2H] D2O, 0.1 mM TSP, 200 mM [U-100% 2H] DPC90% H2O/10% D2O0 mM5.51 atm298Varian INOVA 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA700
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentXEASYBartels et al.
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3processingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax