6F75

Carboxypeptidase T mutant L254N with Sulphamoil Leucine


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1LIQUID DIFFUSION2961,4 SA

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 158.93α = 90
b = 158.93β = 90
c = 105.4γ = 120
Symmetry
Space GroupP 63 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2016-12-04MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL41XU0.8SPring-8BL41XU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8929.1299.954.25389.459832
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.891.939100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.8929.1259832309599.950.157440.15620.18114RANDOM19.438
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.11
r_sphericity_free20.286
r_dihedral_angle_4_deg15.889
r_dihedral_angle_3_deg13.069
r_dihedral_angle_1_deg6.644
r_sphericity_bonded4.46
r_long_range_B_refined2.471
r_long_range_B_other2.131
r_scangle_other1.964
r_scbond_it1.72
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.11
r_sphericity_free20.286
r_dihedral_angle_4_deg15.889
r_dihedral_angle_3_deg13.069
r_dihedral_angle_1_deg6.644
r_sphericity_bonded4.46
r_long_range_B_refined2.471
r_long_range_B_other2.131
r_scangle_other1.964
r_scbond_it1.72
r_scbond_other1.664
r_mcangle_other1.496
r_mcangle_it1.494
r_angle_refined_deg1.385
r_mcbond_it1.19
r_mcbond_other1.185
r_rigid_bond_restr1.104
r_angle_other_deg1.002
r_chiral_restr0.086
r_bond_refined_d0.009
r_gen_planes_refined0.005
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2581
Nucleic Acid Atoms
Solvent Atoms328
Heterogen Atoms28

Software

Software
Software NamePurpose
REFMACrefinement
iMOSFLMdata reduction
SCALAdata scaling
PHASERphasing