6F3X

Backbone structure of Des-Arg10-Kallidin (DAKD) peptide in frozen DDM/CHS detergent micelle solution determined by DNP-enhanced MAS SSNMR


SOLID-STATE NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 13C-13C DQ-SQ300 uM [U-13C; U-15N] K1 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
22D 15N-13C TEDOR300 uM [U-13C; U-15N] K1 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
32D 13C-13C DQ-SQ300 uM [U-13C; U-15N] R2S7 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
42D 15N-13C TEDOR300 uM [U-13C; U-15N] R2S7 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
52D 13C-13C DQ-SQ300 uM [U-13C; U-15N] P3 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
62D 15N-13C TEDOR300 uM [U-13C; U-15N] P3 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
72D 13C-13C DQ-SQ300 uM [U-13C; U-15N] P4 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
82D 15N-13C TEDOR300 uM [U-13C; U-15N] P4 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
92D 13C-13C DQ-SQ300 uM [U-13C; U-15N] G5F6 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
102D 15N-13C TEDOR300 uM [U-13C; U-15N] G5F6 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
112D 13C-13C DQ-SQ300 uM [U-13C; U-15N] S7P9 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
122D 15N-13C TEDOR300 uM [U-13C; U-15N] S7P9 Des-Arg10-Kallidin (DAKD), 10 mM not labeled AMUPOL, 50 mM not labeled HEPES, 150 mM not labeled NaCl, 4 % w/v not labeled DDM, 0.4 % w/v not labeled CHS10% H2O/ 40%D2O/ 50% d8-glycerol175 mM7.61 atm110Bruker AVANCE II 400
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE II400
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number500
Conformers Submitted Total Number10
Representative Model9 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
2structure calculationCYANA2.1Guntert, Mumenthaler and Wuthrich
6chemical shift assignmentTopSpinBruker Biospin
3collectionTopSpinBruker Biospin
5processingTopSpinBruker Biospin
4data analysisTALOS+Shen, Delaglio, Cornilescu, Bax