6BF2
Solution structure of a Bcl-xL S62E mutant
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCACB | 2.2 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE III 600 |
2 | 3D CBCA(CO)NH | 2.2 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE III 600 |
3 | 3D HNCO | 2.2 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE III 600 |
4 | 3D HN(CA)CO | 2.2 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE III 600 |
5 | 3D 1H-15N NOESY | 1.9 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE II 800 |
6 | 3D 1H-13C NOESY aliphatic | 1.9 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE II 800 |
7 | 3D 1H-13C NOESY aromatic | 1.9 mM [U-99% 13C; U-99% 15N] Bcl-xL S62E | 92% H2O/8% D2O | 50 mM | 7 | 1 atm | 298 | Bruker AVANCE II 800 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE II | 800 |
2 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | 1000 steps all atom all energy terms in water dielectric | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 400 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (target function) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 2.1 and 3.1 | Bruker Biospin |
2 | processing | TopSpin | 3.1 | Bruker Biospin |
3 | peak picking | CARA | Keller and Wuthrich | |
5 | chemical shift assignment | CARA | Keller and Wuthrich | |
4 | structure calculation | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
7 | structure calculation | TALOS | Cornilescu, Delaglio and Bax | |
6 | refinement | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |