5VKG

Solution-state NMR structural ensemble of human Tsg101 UEV in complex with tenatoprazole

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 M	5.8	1 atm	300	Bruker AVANCE 600
2	2D 1H-13C HSQC aliphatic	0.6 mM [U-13C; U-15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	100% D2O	0.1 mM	5.8	1 atm	300	Bruker AVANCE 800
3	3D HNCACB	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 M	5.8	1 atm	300	Bruker AVANCE 600
4	3D H(CCO)NH	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 M	5.8	1 atm	300	Bruker AVANCE 600
5	3D 1H-15N NOESY	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 M	5.8	1 atm	300	Bruker AVANCE 800
6	3D 1H-13C NOESY aliphatic	0.6 mM [U-13C; U-15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	100% D2O	0.1 mM	5.8	1 atm	300	Bruker AVANCE 900
7	3D 1H-13C NOESY aromatic	0.6 mM [U-13C; U-15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	100% D2O	0.1 mM	5.8	1 atm	300	Bruker AVANCE 800
8	3D 1H-13C-12C filtered NOESY aliphatic	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 mM	5.8	1 atm	300	Bruker AVANCE 800
9	3D CBCA(CO)NH	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 M	5.8	1 atm	300	Bruker AVANCE 600
10	3D C(CO)NH	0.6 mM [U-98% 13C; U-98% 15N] Tsg101, 0.6 mM Tenatoprazole, 20 mM potassium phosphate, 50 mM sodium chloride	93% H2O/7% D2O	0.1 M	5.8	1 atm	300	Bruker AVANCE 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600
2	Bruker	AVANCE	800
3	Bruker	AVANCE	900

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin	3.0	Bruker Biospin
2	processing	NMRPipe	8.2	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	processing	NMRDraw	8.2	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	peak picking	Analysis	2.4.2	CCPN
5	chemical shift assignment	Analysis	2.4.2	CCPN
6	data analysis	Analysis	2.4.2	CCPN
7	refinement	X-PLOR NIH	2.37.7	Schwieters, Kuszewski, Tjandra and Clore
8	data analysis	PSVS	1.5	Bhattacharya and Montelione
9	geometry optimization	Gaussian	9	Gaussian, Inc.
10	data analysis	TALOS-N	4.12	Yang Shen and Ad Bax
11	structure calculation	X-PLOR NIH	2.37.7	Schwieters, Kuszewski, Tjandra and Clore