X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.62900.1 M Sodium Fluoride, 10 % PEG 3350,
Crystal Properties
Matthews coefficientSolvent content
2.3447.46

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 74.234α = 90
b = 57.117β = 104.87
c = 103.575γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2014-11-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAUSTRALIAN SYNCHROTRON BEAMLINE MX20.979Australian SynchrotronMX2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.147.199.40.9948.3549197

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT2.147.146754243099.720.234990.233350.26716RANDOM30.648
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.920.31-1.53-1.37
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.423
r_dihedral_angle_3_deg14.311
r_dihedral_angle_4_deg13.892
r_long_range_B_refined6.771
r_long_range_B_other6.77
r_dihedral_angle_1_deg5.859
r_scangle_other4.691
r_mcangle_it3.597
r_mcangle_other3.597
r_scbond_it3.184
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.423
r_dihedral_angle_3_deg14.311
r_dihedral_angle_4_deg13.892
r_long_range_B_refined6.771
r_long_range_B_other6.77
r_dihedral_angle_1_deg5.859
r_scangle_other4.691
r_mcangle_it3.597
r_mcangle_other3.597
r_scbond_it3.184
r_scbond_other3.182
r_mcbond_it2.39
r_mcbond_other2.386
r_angle_refined_deg1.435
r_angle_other_deg1.085
r_chiral_restr0.086
r_bond_refined_d0.012
r_gen_planes_refined0.006
r_bond_other_d0.004
r_gen_planes_other0.003
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6079
Nucleic Acid Atoms
Solvent Atoms343
Heterogen Atoms6

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
PHENIXphasing