5U9V

Ocellatin-LB1, solution structure in DPC micelle by NMR spectroscopy


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1.5 mM Ocellatin-LB1, 400 mM d38 DPC, 5 % 99.75% D2Otrifluoroethanol/waterNull4ambient273.15Bruker AvanceIII 800
22D 1H-1H NOESY1.5 mM Ocellatin-LB1, 400 mM d38 DPC, 5 % 99.75% D2Otrifluoroethanol/waterNull4ambient273.15Bruker AvanceIII 800
32D 1H-15N HSQC1.5 mM Ocellatin-LB1, 400 mM d38 DPC, 5 % 99.75% D2Otrifluoroethanol/waterNull4ambient273.15Bruker AvanceIII 800
42D 1H-13C HSQC1.5 mM Ocellatin-LB1, 400 mM d38 DPC, 5 % 99.75% D2Otrifluoroethanol/waterNull4ambient273.15Bruker AvanceIII 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvanceIII800
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionxwinnmrBruker Biospin
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4data analysisNMRViewJohnson, One Moon Scientific
5data analysisProcheckLaskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton
6data analysisMolmolKoradi, Billeter and Wuthrich
7refinementX-PLOR NIH2.27Schwieters, Kuszewski, Tjandra and Clore
8structure calculationX-PLOR NIH2.27Schwieters, Kuszewski, Tjandra and Clore
9geometry optimizationX-PLOR NIH2.27Schwieters, Kuszewski, Tjandra and Clore