5T4C

Crystal structure of BhGH81 mutant in complex with laminaro-hexaose


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.529115% PEG 10000, 0.2 M ammonium acetate, 0.1 M bis-tris
Crystal Properties
Matthews coefficientSolvent content
2.9157.73

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.48α = 90
b = 96.5β = 90
c = 156.87γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRAYONIX MX-3002014-09-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCLSI BEAMLINE 08ID-10.97971CLSI08ID-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.882.191000.1270.99511.37.392890
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.91000.5110.8673.76.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT5T491.882.1988168463599.990.14260.14150.1628RANDOM14.807
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.470.86-0.39
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.293
r_dihedral_angle_4_deg14.711
r_dihedral_angle_3_deg11.655
r_dihedral_angle_1_deg6.784
r_angle_refined_deg1.372
r_mcangle_it1.205
r_angle_other_deg0.942
r_mcbond_it0.736
r_mcbond_other0.724
r_chiral_restr0.117
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.293
r_dihedral_angle_4_deg14.711
r_dihedral_angle_3_deg11.655
r_dihedral_angle_1_deg6.784
r_angle_refined_deg1.372
r_mcangle_it1.205
r_angle_other_deg0.942
r_mcbond_it0.736
r_mcbond_other0.724
r_chiral_restr0.117
r_bond_refined_d0.009
r_gen_planes_refined0.006
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6025
Nucleic Acid Atoms
Solvent Atoms771
Heterogen Atoms221

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction