5SUI

Ribosome assembly factor NSA1: C-terminal truncation


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.529820.1%(v/v) PEG 1500, 13.4%(v/v) PEG 400, 0.1M HEPES/ Sodium hydroxide pH 7.5
Crystal Properties
Matthews coefficientSolvent content
1.8437.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.327α = 90
b = 81.052β = 90
c = 87.371γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCD2016-02-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 22-BM1.0000APS22-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.359.4299.929.67.293271

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.359.4293271199499.860.12960.12890.1618RANDOM21.961
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.020.010.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.634
r_sphericity_free24.874
r_dihedral_angle_3_deg14.277
r_dihedral_angle_4_deg13.687
r_sphericity_bonded12.597
r_dihedral_angle_1_deg7.357
r_rigid_bond_restr6.123
r_mcangle_it3.851
r_mcbond_it3.535
r_mcbond_other3.481
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.634
r_sphericity_free24.874
r_dihedral_angle_3_deg14.277
r_dihedral_angle_4_deg13.687
r_sphericity_bonded12.597
r_dihedral_angle_1_deg7.357
r_rigid_bond_restr6.123
r_mcangle_it3.851
r_mcbond_it3.535
r_mcbond_other3.481
r_angle_refined_deg2.429
r_angle_other_deg1.225
r_chiral_restr0.19
r_bond_refined_d0.03
r_gen_planes_refined0.014
r_gen_planes_other0.003
r_bond_other_d0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3007
Nucleic Acid Atoms
Solvent Atoms440
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data collection
HKL-2000data scaling
SOLVEphasing
RESOLVEphasing
REFMACrefinement
PDB_EXTRACTdata extraction