X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP29320% (w/v) PEG 3350 and 0.2 M Lithium Acetate
Crystal Properties
Matthews coefficientSolvent content
2.0941.12

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 49.46α = 90
b = 80β = 114.94
c = 50.81γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2016-05-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I030.976DiamondI03

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3744.85991.43.674740

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.3744.8571107360399.380.200770.19820.25181RANDOM16.851
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.55-1.1-1.020.35
RMS Deviations
KeyRefinement Restraint Deviation
r_sphericity_free38.35
r_dihedral_angle_2_deg29.926
r_dihedral_angle_4_deg17.314
r_dihedral_angle_3_deg12.26
r_sphericity_bonded11.973
r_dihedral_angle_1_deg7.322
r_long_range_B_refined4.409
r_long_range_B_other4.409
r_scangle_other2.326
r_scbond_it2.034
RMS Deviations
KeyRefinement Restraint Deviation
r_sphericity_free38.35
r_dihedral_angle_2_deg29.926
r_dihedral_angle_4_deg17.314
r_dihedral_angle_3_deg12.26
r_sphericity_bonded11.973
r_dihedral_angle_1_deg7.322
r_long_range_B_refined4.409
r_long_range_B_other4.409
r_scangle_other2.326
r_scbond_it2.034
r_scbond_other2.034
r_rigid_bond_restr1.91
r_mcangle_it1.899
r_mcangle_other1.899
r_angle_refined_deg1.709
r_mcbond_it1.629
r_mcbond_other1.628
r_angle_other_deg1.031
r_chiral_restr0.095
r_bond_refined_d0.013
r_gen_planes_refined0.008
r_bond_other_d0.003
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2823
Nucleic Acid Atoms
Solvent Atoms358
Heterogen Atoms89

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing