X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION, RECRYSTALLIZATION6.52900.1M Bis-Tris (pH 6.5), 26% (w/v) PEG 3350
Crystal Properties
Matthews coefficientSolvent content
2.2946.37

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 46.61α = 90
b = 145.58β = 105.12
c = 55.48γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2014-11-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE BL-5A1Photon FactoryBL-5A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8672.89815.85.555555

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.8672.7955555285697.820.199730.1980.23335RANDOM36.083
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.010.01-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.925
r_dihedral_angle_4_deg24.771
r_dihedral_angle_3_deg18.055
r_long_range_B_refined8.689
r_long_range_B_other8.681
r_scangle_other6.323
r_dihedral_angle_1_deg6.097
r_mcangle_it4.635
r_mcangle_other4.635
r_scbond_it4.279
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.925
r_dihedral_angle_4_deg24.771
r_dihedral_angle_3_deg18.055
r_long_range_B_refined8.689
r_long_range_B_other8.681
r_scangle_other6.323
r_dihedral_angle_1_deg6.097
r_mcangle_it4.635
r_mcangle_other4.635
r_scbond_it4.279
r_scbond_other4.279
r_mcbond_it3.453
r_mcbond_other3.452
r_angle_refined_deg1.771
r_angle_other_deg1.158
r_chiral_restr0.147
r_bond_refined_d0.02
r_gen_planes_refined0.009
r_bond_other_d0.006
r_gen_planes_other0.003
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4765
Nucleic Acid Atoms
Solvent Atoms265
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
iMOSFLMdata reduction
Aimlessdata scaling
REFMACphasing