5GAK

Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A


ELECTRON MICROSCOPY
Sample
Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A
Specimen Preparation
Sample Aggregation StatePARTICLE
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles62532
Reported Resolution (Å)3.88
Resolution MethodFSC 0.143 CUT-OFF
Other DetailsComputational sorting and classification was done in SPIDER, movie processing and high resolution refinement was done with RELION
Refinement Type
Symmetry Type
Point SymmetryC1
Data Acquisition
Detector TypeFEI FALCON II (4k x 4k)
Electron Dose (electrons/Å**2)20
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)
Maximum Defocus (nm)
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS2.7
Imaging ModeBRIGHT FIELD
Specimen Holder ModelFEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging DetailsDetails can be retrieved from EMD-3227.
EM Software
TaskSoftware PackageVersion
PARTICLE SELECTIONSignature
IMAGE ACQUISITIONEPU1.3
CTF CORRECTIONCTFFIND4
INITIAL EULER ASSIGNMENTRELION1.4
FINAL EULER ASSIGNMENTRELION1.4
RECONSTRUCTIONRELION1.4
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING ONLYEach Particle