X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
14% PEG 6000, 0.1 M MES PH 6, 0.05 M MGCL2, 0.1 M NA BR, 1% BETA-MERCAPTOETHANOL
Crystal Properties
Matthews coefficientSolvent content
2.4549.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 64.01α = 90
b = 153.94β = 92.37
c = 134.48γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMSC SATURN 944MIRRORS2015-06-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU MICROMAX-007 HF

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.223.6694.80.166.43.862373217.25
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.3292.80.6423.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 4ASJ2.2134.365262257314494.630.2020.19940.2592RANDOM31.519
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.48-0.360.567-1.014
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.502
r_dihedral_angle_4_deg16.965
r_dihedral_angle_3_deg15.16
r_dihedral_angle_1_deg6.91
r_scangle_it4.206
r_mcangle_it3.562
r_scbond_it2.57
r_mcbond_it2.241
r_mcbond_other2.241
r_angle_refined_deg1.686
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.502
r_dihedral_angle_4_deg16.965
r_dihedral_angle_3_deg15.16
r_dihedral_angle_1_deg6.91
r_scangle_it4.206
r_mcangle_it3.562
r_scbond_it2.57
r_mcbond_it2.241
r_mcbond_other2.241
r_angle_refined_deg1.686
r_angle_other_deg1.018
r_nbd_refined0.207
r_nbd_other0.196
r_nbtor_refined0.176
r_xyhbond_nbd_refined0.144
r_chiral_restr0.094
r_bond_refined_d0.014
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9220
Nucleic Acid Atoms
Solvent Atoms337
Heterogen Atoms164

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
MOLREPphasing