5FQR

Selective estrogen receptor downregulator antagonists: Tetrahydroisoquinoline phenols 2.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
10.1 M PCTP, PH 6.5 (0.04 M SODIUM PROPIONATE, 0.02 M SODIUM CACODYLATE, 0.04 M BIS-TRIS PROPANE), 22% PEG3350, 0.2M MGCL2
Crystal Properties
Matthews coefficientSolvent content
2.0740.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 58.1α = 90
b = 58.1β = 90
c = 274.38γ = 120
Symmetry
Space GroupP 65 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMONDDiamond

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.95099.80.059223442

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUTNONE1.8850.3222344118099.880.214020.212860.23686RANDOM30.215
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.30.30.3-0.96
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.045
r_dihedral_angle_4_deg19.322
r_dihedral_angle_3_deg13.873
r_dihedral_angle_1_deg4.073
r_long_range_B_refined3.956
r_long_range_B_other3.715
r_scangle_other1.726
r_mcangle_it1.359
r_mcangle_other1.359
r_scbond_it1.073
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.045
r_dihedral_angle_4_deg19.322
r_dihedral_angle_3_deg13.873
r_dihedral_angle_1_deg4.073
r_long_range_B_refined3.956
r_long_range_B_other3.715
r_scangle_other1.726
r_mcangle_it1.359
r_mcangle_other1.359
r_scbond_it1.073
r_scbond_other1.051
r_angle_refined_deg0.928
r_mcbond_it0.82
r_mcbond_other0.818
r_angle_other_deg0.704
r_chiral_restr0.051
r_bond_refined_d0.005
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1807
Nucleic Acid Atoms
Solvent Atoms88
Heterogen Atoms26

Software

Software
Software NamePurpose
REFMACrefinement