X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.529520mM Tris HCl pH 7.5, 200mM NaCl, 5mM DTT
Crystal Properties
Matthews coefficientSolvent content
3.2762.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 78.822α = 90
b = 78.822β = 90
c = 197.456γ = 120
Symmetry
Space GroupP 65 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 345 mm platemirrors2013-05-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU MICROMAX-007 HF1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.65099.410.68.611850

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.6501128656599.320.21830.21580.2669RANDOM53.346
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.830.410.83-2.69
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.506
r_dihedral_angle_3_deg23.971
r_dihedral_angle_4_deg23.306
r_mcangle_it6.835
r_dihedral_angle_1_deg6.344
r_mcbond_it4.719
r_mcbond_other4.707
r_angle_refined_deg1.722
r_angle_other_deg1.272
r_chiral_restr0.094
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.506
r_dihedral_angle_3_deg23.971
r_dihedral_angle_4_deg23.306
r_mcangle_it6.835
r_dihedral_angle_1_deg6.344
r_mcbond_it4.719
r_mcbond_other4.707
r_angle_refined_deg1.722
r_angle_other_deg1.272
r_chiral_restr0.094
r_bond_refined_d0.015
r_gen_planes_refined0.008
r_bond_other_d0.006
r_gen_planes_other0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1583
Nucleic Acid Atoms
Solvent Atoms45
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data collection
HKL-2000data scaling
REFMACrefinement
PDB_EXTRACTdata extraction