X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1BATCH MODE295.65100% METHANOL
Crystal Properties
Matthews coefficientSolvent content
1.4817

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 10.065α = 75.16
b = 18.791β = 88.54
c = 31.424γ = 86.48
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRIGAKU2014-08-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU MICROMAX-007 HF1.542

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.12599.80.10815.2534.51424514245
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.11.1299.60.2935.4124

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONAB INITIOFREE R1.1251424574999.80.10980.1206RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
Coordinate Error
Structure Solution MethodRefinement High ResolutionRefinement Low Resolution
1318290
RMS Deviations
KeyRefinement Restraint Deviation
s_zero_chiral_vol1.0486
s_similar_adp_cmpnt0.093
s_non_zero_chiral_vol0.0789
s_angle_d0.0413
s_anti_bump_dis_restr0.0308
s_bond_d0.0202
s_from_restr_planes0.0196
s_rigid_bond_adp_cmpnt0.0086
s_approx_iso_adps0.0038
s_similar_dist
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms138
Nucleic Acid Atoms
Solvent Atoms9
Heterogen Atoms139

Software

Software
Software NamePurpose
SHELXLrefinement
DENZOdata reduction
SHELXphasing
SCALEPACKdata scaling