4IJY

Crystal Structure of the ETEC Secreted Protein CofJ


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5293100 mM BisTris (pH 6.5), 200 mM NaI and 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
4.7273.97

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 143.489α = 90
b = 143.489β = 90
c = 59.29γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 325 mm CCD2008-02-22MSINGLE WAVELENGTH
21x-ray100CCDMARMOSAIC 325 mm CCD2008-07-22MMAD
31x-ray100CCDMARMOSAIC 325 mm CCD2008-07-22MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL9-20.9790SSRLBL9-2
2SYNCHROTRONSSRL BEAMLINE BL9-20.9100SSRLBL9-2
3SYNCHROTRONSSRL BEAMLINE BL9-20.9794SSRLBL9-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,2,32.62098.2218473

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.620218472066611231000.213770.212290.24082RANDOM43.54
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.11-0.06-0.110.17
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.576
r_dihedral_angle_4_deg21.658
r_dihedral_angle_3_deg17.476
r_dihedral_angle_1_deg6.246
r_scangle_it1.875
r_angle_refined_deg1.188
r_scbond_it1.133
r_mcangle_it0.65
r_mcbond_it0.326
r_chiral_restr0.087
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.576
r_dihedral_angle_4_deg21.658
r_dihedral_angle_3_deg17.476
r_dihedral_angle_1_deg6.246
r_scangle_it1.875
r_angle_refined_deg1.188
r_scbond_it1.133
r_mcangle_it0.65
r_mcbond_it0.326
r_chiral_restr0.087
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2461
Nucleic Acid Atoms
Solvent Atoms59
Heterogen Atoms32

Software

Software
Software NamePurpose
Blu-Icedata collection
SOLVEphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling