4A52

NMR structure of the imipenem-acylated L,D-transpeptidase from Bacillus subtilis


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
113C-HSQC-NOESY90% H2O/10% D2O0.156.51.0 atm298.0
21H-15N- HSQC90% H2O/10% D2O0.156.51.0 atm298.0
31H -13C-HSQC90% H2O/10% D2O0.156.51.0 atm298.0
413C- HSQC-NOESY METHYL SELECTIVE90% H2O/10% D2O0.156.51.0 atm298.0
515N-HSQC-NOESY90% H2O/10% D2O
61H-15N- HMQC OPTIMIZED FOR IMIDAZOLE RING OF HISTIDINES90% H2O/10% D2O
7HNCO90% H2O/10% D2O
8HNCACB90% H2O/10% D2O
91H- 13C-HSQC CENTERED ON AROMATICS90% H2O/10% D2O
1013C-HSQC-NOESY CENTERED ON AROMATICS90% H2O/10% D2O
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance900
2BrukerAvance800
3VarianINOVA600
NMR Refinement
MethodDetailsSoftware
ITERATIVE STRUCTURE CALCULATION WITH ARIA2.3REFINEMENT IN WATER AFTER 8 ITERATIONS.CNS1.2
NMR Ensemble Information
Conformer Selection CriteriaSTRUCTURE WITH THE LOWEST ENERGY
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (n/a)
Additional NMR Experimental Information
DetailsTHE 20 NMR STRUCTURES WERE DETERMINED USING TRIPLE- RESONANCE NMR SPECTROSCOPY ON A 13C, 15N-LABELED LDTBS SAMPLE INCUBATED WITH 2.5 EQUIVALENTS OF IMIPENEM ANTIBIOTIC. THESE STRUCTURES WERE REFINED WITH RDCS, AND REFINED IN WATER WITHIN CNS ARIA.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNS1.2BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN
2structure solutionCNS1.2
3structure solutionTALOS ANYANY
4structure solutionUNIO10
5structure solutionNMRDRAW ANYANY
6structure solutionNMRPIPE ANYANY
7structure solutionCCPNMR ANALYSIS2.2