3ZQD
B. subtilis L,D-transpeptidase
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | [1H | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
2 | 15N]-HSQC | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
3 | 13C]-NOESY-HSQ IN THE ALIPHATIC REGION | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
4 | HNCACB | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
5 | HNCO | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
6 | 13C]-HSQC IN THE ALIPHATIC REGION | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
7 | METHYL SELECTIVE [1H | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
8 | 13C] -HSQC-NOESY | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
9 | 13C]-HSQC IN THE AROMATIC REGION | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
10 | 15N] SOFAST-HMQC ON THE HISTIDINES | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
11 | [1H-15N]-NOESY- HSQC | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 | ||
12 | 13C]- NOESY-HSQC IN THE AROMATIC REGION | 90% H2O/10% D2O | 0.15 M | 6.5 | 1.0 atm | 298.0 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | AVANCE | 800 |
2 | Bruker | AVANCE | 900 |
3 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
ARIA | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | MINIMAL ENERGY |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY AND N-H AND CA-HA RDCS ON 13C, 15N-LABELED LDTBS. THE 20 STRUCTURES OF MINIMAL ENERGY WERE FURTHER REFINED IN WATER. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.2 | BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, READ,RICE,SIMONSON,WARREN |
2 | structure solution | NMRDraw | ||
3 | structure solution | NMRPipe | ||
4 | structure solution | CcpNmr Analysis | 2.1 |