3RQ9

Structure of Tsi2, a Tse2-immunity protein from Pseudomonas aeruginosa


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP52988% PEG 4000, 0.1M sodium acetate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
1.7128.17

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 27.807α = 110.48
b = 34.063β = 95.94
c = 37.65γ = 95.82
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152009-11-25MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.20.9792, 0.9075ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
10.99501000.03531.23.76052160521
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
10.991.01450.1973.72.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT134.886052160525324691.240.146550.144960.17613RANDOM10.798
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.450.31-0.080.4-0.02-0.81
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.879
r_dihedral_angle_4_deg29.886
r_sphericity_free11.585
r_scangle_it7.958
r_sphericity_bonded7.616
r_scbond_it5.896
r_dihedral_angle_1_deg5.029
r_mcangle_it4.411
r_rigid_bond_restr3.456
r_mcbond_it3.07
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.879
r_dihedral_angle_4_deg29.886
r_sphericity_free11.585
r_scangle_it7.958
r_sphericity_bonded7.616
r_scbond_it5.896
r_dihedral_angle_1_deg5.029
r_mcangle_it4.411
r_rigid_bond_restr3.456
r_mcbond_it3.07
r_angle_refined_deg1.7
r_mcbond_other1.168
r_angle_other_deg1.022
r_chiral_restr0.094
r_bond_refined_d0.018
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
r_dihedral_angle_3_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1271
Nucleic Acid Atoms
Solvent Atoms175
Heterogen Atoms

Software

Software
Software NamePurpose
ADSCdata collection
SOLVEphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling