3R1K

Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis H37Rv in complex with CoA and an acetamide moiety


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.52950.1 M Tris-HCl, 12% PEG 8000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
3.9368.72

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 174.935α = 90
b = 174.935β = 90
c = 124.686γ = 120
Symmetry
Space GroupH 3 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCD2010-11-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-D0.9794APS21-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.955096.8492432

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.95405076649243262297.580.19630.194820.22365RANDOM30.546
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.81-0.41-0.811.22
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.36
r_dihedral_angle_3_deg18.256
r_dihedral_angle_4_deg17.822
r_rigid_bond_restr8.545
r_scbond_it7.537
r_dihedral_angle_1_deg5.903
r_scangle_it5.74
r_sphericity_free4.616
r_sphericity_bonded4.349
r_mcangle_it1.87
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.36
r_dihedral_angle_3_deg18.256
r_dihedral_angle_4_deg17.822
r_rigid_bond_restr8.545
r_scbond_it7.537
r_dihedral_angle_1_deg5.903
r_scangle_it5.74
r_sphericity_free4.616
r_sphericity_bonded4.349
r_mcangle_it1.87
r_angle_refined_deg1.542
r_mcbond_it1.232
r_nbtor_refined0.302
r_symmetry_vdw_refined0.224
r_nbd_refined0.204
r_symmetry_hbond_refined0.15
r_xyhbond_nbd_refined0.128
r_chiral_restr0.112
r_bond_refined_d0.013
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3048
Nucleic Acid Atoms
Solvent Atoms291
Heterogen Atoms52

Software

Software
Software NamePurpose
HKL-2000data collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling