X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION299vapor diffusion, temperature 299K
Crystal Properties
Matthews coefficientSolvent content
3.1861.29

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 141.827α = 90
b = 141.827β = 90
c = 141.827γ = 90
Symmetry
Space GroupP 21 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42006-11-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-20.933ESRFID14-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1270.91399.70.1370.13785.56405164051
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.111000.5310.5311.45.59281

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT270.896361832271000.21870.21680.2543RANDOM24.5479
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.244
r_dihedral_angle_4_deg17.13
r_dihedral_angle_3_deg14.466
r_dihedral_angle_1_deg5.896
r_scangle_it4.913
r_scbond_it3.209
r_mcangle_it2.032
r_angle_refined_deg1.833
r_mcbond_it1.122
r_nbtor_refined0.309
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.244
r_dihedral_angle_4_deg17.13
r_dihedral_angle_3_deg14.466
r_dihedral_angle_1_deg5.896
r_scangle_it4.913
r_scbond_it3.209
r_mcangle_it2.032
r_angle_refined_deg1.833
r_mcbond_it1.122
r_nbtor_refined0.309
r_symmetry_vdw_refined0.235
r_nbd_refined0.22
r_xyhbond_nbd_refined0.15
r_symmetry_hbond_refined0.146
r_chiral_restr0.129
r_symmetry_metal_ion_refined0.085
r_metal_ion_refined0.03
r_bond_refined_d0.014
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5148
Nucleic Acid Atoms
Solvent Atoms343
Heterogen Atoms112

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction