X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.22980.1M MES, 50MM MgCl2, 10% (W/V)% monomethylether PEG 2000, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.5651.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 100.403α = 90
b = 102.731β = 91.02
c = 137.817γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mmMIRRORS2009-06-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMAX II BEAMLINE I911-2MAX III911-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.928.598.80.09412.73.6217370
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.9298.40.5662.73.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.928.5214152321798.80.1950.1950.246RANDOM14.3
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.05-0.29-0.471.52
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.348
r_dihedral_angle_4_deg17.101
r_dihedral_angle_3_deg14.689
r_dihedral_angle_1_deg7.206
r_scangle_it4.451
r_scbond_it2.871
r_angle_refined_deg1.968
r_mcangle_it1.844
r_mcbond_it1.099
r_angle_other_deg0.815
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.348
r_dihedral_angle_4_deg17.101
r_dihedral_angle_3_deg14.689
r_dihedral_angle_1_deg7.206
r_scangle_it4.451
r_scbond_it2.871
r_angle_refined_deg1.968
r_mcangle_it1.844
r_mcbond_it1.099
r_angle_other_deg0.815
r_mcbond_other0.347
r_chiral_restr0.156
r_bond_refined_d0.022
r_gen_planes_refined0.01
r_bond_other_d
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms18135
Nucleic Acid Atoms
Solvent Atoms1818
Heterogen Atoms224

Software

Software
Software NamePurpose
MAR345data collection
FFTmodel building
CCP4model building
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
FFTphasing
CCP4phasing