3KQF

1.8 Angstrom Resolution Crystal Structure of Enoyl-CoA Hydratase from Bacillus anthracis.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP295Protein solution: 0.3M NaCl, 10mM HEPES, pH 7.5. Screen solution: PEG400 28%, CaCl2 0.2M, Hepes 0.1M, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
1.8533.68

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 73.747α = 90
b = 130.721β = 114.47
c = 73.802γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCDBeryllium lenses2009-10-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-G0.97856APS21-ID-G

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8301000.09114.33.8116373116373-322.1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.831000.5562.33.75755

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.829.87109827109827578298.820.157370.157370.15550.19325RANDOM15.177
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.230.980.661.38
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.082
r_dihedral_angle_4_deg12.198
r_dihedral_angle_3_deg9.265
r_scangle_it4.571
r_scbond_it2.785
r_dihedral_angle_1_deg2.704
r_mcangle_it1.56
r_angle_refined_deg1.324
r_mcbond_it0.925
r_angle_other_deg0.864
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.082
r_dihedral_angle_4_deg12.198
r_dihedral_angle_3_deg9.265
r_scangle_it4.571
r_scbond_it2.785
r_dihedral_angle_1_deg2.704
r_mcangle_it1.56
r_angle_refined_deg1.324
r_mcbond_it0.925
r_angle_other_deg0.864
r_mcbond_other0.309
r_chiral_restr0.08
r_bond_refined_d0.011
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms11812
Nucleic Acid Atoms
Solvent Atoms843
Heterogen Atoms7

Software

Software
Software NamePurpose
Blu-Icedata collection
CRANKphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling