3J4T

Helical model of TubZ-Bt two-stranded filament


ELECTRON MICROSCOPY
Sample
TubZ-Bt
Specimen Preparation
Sample Aggregation StateFILAMENT
Vitrification InstrumentFEI VITROBOT MARK III
Cryogen NameETHANE
Sample Vitrification DetailsTubZ was preheated at 37 degrees and polymerization was initiated with saturating GTPgammaS. TubZ was then incubated for 30 seconds at room temperatur ...TubZ was preheated at 37 degrees and polymerization was initiated with saturating GTPgammaS. TubZ was then incubated for 30 seconds at room temperature before sample application, 4.5 second blotting, and plunge-freezing into liquid ethane (FEI VITROBOT MARK III).
3D Reconstruction
Reconstruction MethodHELICAL
Number of Particles
Reported Resolution (Å)10.8
Resolution MethodFSC 0.143 CUT-OFF
Other DetailsFinal map has been low-pass filtered to 11 Angstrom and high-pass filtered to 35 Angstrom. A B-factor of -452 Angstrom was applied using the program b ...Final map has been low-pass filtered to 11 Angstrom and high-pass filtered to 35 Angstrom. A B-factor of -452 Angstrom was applied using the program bfactor. A cylindrical mask of radius ~78 Angstrom has been applied.
Refinement Type
Symmetry TypeHELICAL
Axial SymmetryC1
Axial Rise22.04811
Angular Rotation-168.15849
Map-Model Fitting and Refinement
Id1 (2XKA)
Refinement SpaceREAL
Refinement ProtocolOTHER
Refinement Target
Overall B Value
Fitting Procedure
DetailsMETHOD--Chimera DETAILS--Just local fitting done with Chimera
Data Acquisition
Detector TypeTVIPS TEMCAM-F816 (8k x 8k)
Electron Dose (electrons/Å**2)20
Imaging Experiment1
Date of Experiment2010-05-26
Temperature (Kelvin)
Microscope ModelFEI TECNAI F20
Minimum Defocus (nm)1500
Maximum Defocus (nm)4500
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS2.2
Imaging ModeBRIGHT FIELD
Specimen Holder ModelOTHER
Nominal Magnification62000
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)200
Imaging Details
EM Software
TaskSoftware PackageVersion
MODEL FITTINGUCSF Chimera
RECONSTRUCTIONSPIDER
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
Whole Micrograph