3F84

Structure of fusion complex of major pilin CfaB and major pilin CfaB of CFA/I pilus from ETEC E. coli


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSIONThe protein, 10 mg/ml in a buffer containing 20 mM Tris-HCl (pH 7.5) and 200 mM NaCl, was mixed in a 1:1 ratio with a well solution containing 30% PEG 8000 and 200 mM ammonium sulfate. VAPOR DIFFUSION
Crystal Properties
Matthews coefficientSolvent content
2.5351.34

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 75.151α = 90
b = 134.217β = 90
c = 65.04γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 22-ID1.000APS22-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1150.09515.45.632280

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.35152700057798.550.243560.242470.29392RANDOM14.834
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.77-0.54-3.23
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.608
r_dihedral_angle_1_deg10.274
r_dihedral_angle_4_deg5.163
r_scangle_it4.78
r_scbond_it3.027
r_mcangle_it1.775
r_angle_refined_deg1.377
r_mcbond_it0.961
r_nbtor_refined0.264
r_nbd_refined0.151
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.608
r_dihedral_angle_1_deg10.274
r_dihedral_angle_4_deg5.163
r_scangle_it4.78
r_scbond_it3.027
r_mcangle_it1.775
r_angle_refined_deg1.377
r_mcbond_it0.961
r_nbtor_refined0.264
r_nbd_refined0.151
r_symmetry_vdw_refined0.148
r_xyhbond_nbd_refined0.13
r_chiral_restr0.114
r_symmetry_hbond_refined0.108
r_bond_refined_d0.02
r_gen_planes_refined0.016
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_3_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4398
Nucleic Acid Atoms
Solvent Atoms174
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling