3F1V

E. coli Beta Sliding Clamp, 148-153 Ala Mutant


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5298reservior: 13% isopropanol, 100 mM CaCl2, 100 mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.2344.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 40.838α = 73.83
b = 64.471β = 82.72
c = 72.111γ = 83.76
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray200CCDMARMOSAIC 325 mm CCD2005-07-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL9-11.000SSRLBL9-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.7728.8591.10.0320.05410.53.262282591931132
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.761.8691.10.30.246.432791

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (I)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT01k71.7728.8611299159193313391.110.220.21860.215160.2821RANDOM35.301
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.010.020.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.767
r_dihedral_angle_3_deg17.807
r_dihedral_angle_4_deg17.131
r_dihedral_angle_1_deg6.864
r_scangle_it5.41
r_scbond_it3.466
r_mcangle_it2.127
r_angle_refined_deg2.079
r_mcbond_it1.42
r_symmetry_hbond_refined0.334
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.767
r_dihedral_angle_3_deg17.807
r_dihedral_angle_4_deg17.131
r_dihedral_angle_1_deg6.864
r_scangle_it5.41
r_scbond_it3.466
r_mcangle_it2.127
r_angle_refined_deg2.079
r_mcbond_it1.42
r_symmetry_hbond_refined0.334
r_nbtor_refined0.312
r_symmetry_vdw_refined0.276
r_metal_ion_refined0.265
r_nbd_refined0.246
r_xyhbond_nbd_refined0.183
r_chiral_restr0.139
r_bond_refined_d0.019
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5648
Nucleic Acid Atoms
Solvent Atoms378
Heterogen Atoms3

Software

Software
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
SCALAdata scaling