3ESL

Crystal structure of the conserved N-terminal domain of the mitotic checkpoint component BUB1


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION9.6291LITHIUM SALT, pH 9.60, VAPOR DIFFUSION, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.8256.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 130.304α = 90
b = 59.784β = 97.96
c = 71.299γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152006-05-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM14ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.7434.9298.20.0390.03916.84.15492426.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.741.7898.20.2490.2493.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.7434.9254921278398.10.190.190.216RANDOM30.41
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.625
r_dihedral_angle_4_deg16.507
r_dihedral_angle_3_deg13.02
r_dihedral_angle_1_deg4.758
r_scangle_it4.705
r_mcangle_it3.158
r_scbond_it3.083
r_mcbond_it2.309
r_angle_refined_deg1.075
r_symmetry_hbond_refined0.435
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.625
r_dihedral_angle_4_deg16.507
r_dihedral_angle_3_deg13.02
r_dihedral_angle_1_deg4.758
r_scangle_it4.705
r_mcangle_it3.158
r_scbond_it3.083
r_mcbond_it2.309
r_angle_refined_deg1.075
r_symmetry_hbond_refined0.435
r_nbtor_refined0.308
r_symmetry_vdw_refined0.228
r_nbd_refined0.196
r_xyhbond_nbd_refined0.112
r_chiral_restr0.073
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3464
Nucleic Acid Atoms
Solvent Atoms237
Heterogen Atoms26

Software

Software
Software NamePurpose
PHENIXmodel building
REFMACrefinement
PHENIXphasing