3ELW

Wesselsbron virus Methyltransferase in complex with AdoMet and GpppG


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.929310mM AdoMet, 1mM GpppG, 20% PEG 4000, pH 6.9, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.2946.26

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.885α = 90
b = 70.066β = 90
c = 91.396γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4mirrors2007-04-26MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-30.931ESRFID14-3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.955.61000.113136.32674325470
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.921000.4214.56.43820

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 3ELU1.919.58252912408712931000.164980.164980.162520.21025RANDOM16.27
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.10.21-0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.777
r_dihedral_angle_4_deg12.972
r_dihedral_angle_3_deg12.792
r_dihedral_angle_1_deg4.941
r_scangle_it4.654
r_scbond_it3.154
r_mcangle_it1.983
r_angle_refined_deg1.259
r_mcbond_it1.225
r_nbtor_refined0.294
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.777
r_dihedral_angle_4_deg12.972
r_dihedral_angle_3_deg12.792
r_dihedral_angle_1_deg4.941
r_scangle_it4.654
r_scbond_it3.154
r_mcangle_it1.983
r_angle_refined_deg1.259
r_mcbond_it1.225
r_nbtor_refined0.294
r_symmetry_vdw_refined0.205
r_nbd_refined0.189
r_symmetry_hbond_refined0.137
r_chiral_restr0.121
r_xyhbond_nbd_refined0.118
r_bond_refined_d0.008
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2095
Nucleic Acid Atoms
Solvent Atoms317
Heterogen Atoms103

Software

Software
Software NamePurpose
MOSFLMdata reduction
MOLREPphasing
REFMACrefinement
SCALAdata scaling