3DET

Structure of the E148A, Y445A doubly ungated mutant of E.coli CLC_Ec1, Cl-/H+ antiporter


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.5298300 mM KCl, 26.6% PEG 600, 50 mM Na-cacodylate pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
3.6966.64

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 231.167α = 90
b = 97.514β = 132.88
c = 173.277γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray178CCDMARMOSAIC 300 mm CCD2008-04-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 23-ID-D0.97949APS23-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.88699.90.1060.10610.97.3695496053322
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.82.8699.80.160.164.26.910078

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT- 1OTS structure factor filePDB entry 1OTS2.859.036954960533319391.380.256980.256980.254780.298851OTS structure factor file101.565
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.43-0.030.380.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.411
r_dihedral_angle_4_deg21.655
r_dihedral_angle_3_deg18.138
r_dihedral_angle_1_deg6.408
r_scangle_it2.925
r_angle_refined_deg1.73
r_scbond_it1.69
r_mcangle_it1.466
r_mcbond_it0.778
r_chiral_restr0.099
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.411
r_dihedral_angle_4_deg21.655
r_dihedral_angle_3_deg18.138
r_dihedral_angle_1_deg6.408
r_scangle_it2.925
r_angle_refined_deg1.73
r_scbond_it1.69
r_mcangle_it1.466
r_mcbond_it0.778
r_chiral_restr0.099
r_bond_refined_d0.016
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms13201
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
MAR345dtbdata collection
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing