3CO2

Mlotik1 ion channel cyclic-nucleotide binding domain mutant


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROPammoinium sulfate, Nacitrate, NaCl, VAPOR DIFFUSION, HANGING DROP
Crystal Properties
Matthews coefficientSolvent content
2.4750.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 111.473α = 90
b = 132.349β = 90
c = 39.822γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray2007-04-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X29A0.9NSLSX29A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.555097.90.0794.619637
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.552.6489.60.6123.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.941.031295869499.340.263130.260780.30605RANDOM11.55
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.89-3.761.87
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.925
r_dihedral_angle_4_deg19.058
r_dihedral_angle_3_deg15.485
r_dihedral_angle_1_deg4.703
r_angle_refined_deg0.953
r_scangle_it0.613
r_scbond_it0.401
r_nbtor_refined0.299
r_nbd_refined0.185
r_mcangle_it0.177
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.925
r_dihedral_angle_4_deg19.058
r_dihedral_angle_3_deg15.485
r_dihedral_angle_1_deg4.703
r_angle_refined_deg0.953
r_scangle_it0.613
r_scbond_it0.401
r_nbtor_refined0.299
r_nbd_refined0.185
r_mcangle_it0.177
r_symmetry_vdw_refined0.171
r_mcbond_it0.15
r_symmetry_hbond_refined0.133
r_xyhbond_nbd_refined0.118
r_chiral_restr0.055
r_bond_refined_d0.006
r_gen_planes_refined0.002
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3510
Nucleic Acid Atoms
Solvent Atoms9
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction