2Z2G

NMR Structure of the IQ-modified Dodecamer CTC[IQ]GGCGCCATC


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.7mM modified duplex10mM phosphate buffer with 0.1M NaCl and 0.05mM Na2EDTA (pH 7.0), D2O0.1M NaCl7.01 atm288
2Magnitude COSY0.7mM modified duplex10mM phosphate buffer with 0.1M NaCl and 0.05mM Na2EDTA (pH 7.0), D2O0.1M NaCl7.01 atm288
3E-COSY0.7mM modified duplex10mM phosphate buffer with 0.1M NaCl and 0.05mM Na2EDTA (pH 7.0), D2O0.1M NaCl7.01 atm298
4DQF-COSY0.7mM modified duplex10mM phosphate buffer with 0.1M NaCl and 0.05mM Na2EDTA (pH 7.0), D2O0.1M NaCl7.01 atm298
5P-COSY0.7mM modified duplex10mM phosphate buffer with 0.1M NaCl and 0.05mM Na2EDTA (pH 7.0), D2O0.1M NaCl7.01 atm298
62D NOESY0.7mM modified duplex10mM phosphate buffer with 0.1M NaCl and 0.05mM Na2EDTA (pH 7.0), 90% H2O and 10% D2O0.1M NaCl7.01 atm278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerTXI800
2BrukerQXI600
3BrukerTXI500
NMR Refinement
MethodDetailsSoftware
simulated annealing restrained molecular dynamicsX-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number12
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR3.1Brunger
2processingFelix95.0Biosym/MSI
3iterative matrix relaxationMARDIGRAS5.2Borgias
4iterative matrix relaxationCORMA5.2Keepers