2YLZ

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: Met446Gly MUTANT


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5293CRYSTALS WERE GROWN AT 293 K BY THE VAPOUR DIFFUSION METHOD. HANGING DROPS WERE FORMED BY MIXING EQUAL VOLUMES OF 18 MG PROTEIN/ML IN 5 MM FAD AND 50 MM SODIUM PHOSPHATE PH 7.0, AND OF A WELL SOLUTION CONSISTING OF 1.5 M AMMONIUM SULPHATE AND 0.5 M LITHIUM CHLORIDE.
Crystal Properties
Matthews coefficientSolvent content
3.4350

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 86.8α = 90
b = 115.91β = 90
c = 166.58γ = 90
Symmetry
Space GroupI 2 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 210MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-1ESRFID14-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12301000.0911.6456991
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.11000.424.84

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1W4X236.454104288799.970.191480.189630.22577RANDOM26.185
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.260.171.09
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.232
r_dihedral_angle_4_deg18.842
r_dihedral_angle_3_deg14.481
r_dihedral_angle_1_deg5.871
r_scangle_it5.037
r_scbond_it3.084
r_mcangle_it1.966
r_angle_refined_deg1.607
r_mcbond_it1.08
r_chiral_restr0.112
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.232
r_dihedral_angle_4_deg18.842
r_dihedral_angle_3_deg14.481
r_dihedral_angle_1_deg5.871
r_scangle_it5.037
r_scbond_it3.084
r_mcangle_it1.966
r_angle_refined_deg1.607
r_mcbond_it1.08
r_chiral_restr0.112
r_bond_refined_d0.018
r_gen_planes_refined0.008
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4256
Nucleic Acid Atoms
Solvent Atoms338
Heterogen Atoms63

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing