2RS4

NMR structure of stereo-array isotope labelled (SAIL) peptidyl-prolyl cis-trans isomerase from E. coli (EPPIb)

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
2	2D 1H-13C HSQC aliphatic	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
3	2D 1H-13C HSQC aromatic	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
4	3D HNCA	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
5	3D HNCACB	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
6	3D HNCO	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
7	3D CBCA(CO)NH	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
8	3D HN(CO)CA	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
9	3D HCCH-TOCSY	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
10	3D 1H-15N NOESY	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
11	3D 1H-13C NOESY aliphatic	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
12	3D 1H-13C NOESY aromatic	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
13	3D 1H-13C NOESY aromatic	0.3 mM SAIL [z-SAIL Phe, e-SAIL Tyr] EPPIb-5, 50 mM sodium phosphate-6, 1 mM DTT-7, 100 mM sodium chloride-8	90% H2O/10% D2O	0.4	6.2	ambient	310
14	3D 1H-13C NOESY aromatic	0.3 mM SAIL [d-SAIL Phe, d-SAIL Tyr] EPPIb-9, 50 mM sodium phosphate-10, 1 mM DTT-11, 100 mM sodium chloride-12	90% H2O/10% D2O	0.4	6.2	ambient	310
15	2D HB(CBCG)HE	0.3 mM SAIL [e-SAIL Phe, e-SAIL Tyr] EPPIb-1, 50 mM sodium phosphate-2, 1 mM DTT-3, 100 mM sodium chloride-4	90% H2O/10% D2O	0.4	6.2	ambient	310
16	2D HB(CBCGCZ) HZ	0.3 mM SAIL [z-SAIL Phe, e-SAIL Tyr] EPPIb-5, 50 mM sodium phosphate-6, 1 mM DTT-7, 100 mM sodium chloride-8	90% H2O/10% D2O	0.4	6.2	ambient	310

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600
2	Bruker	DRX	800

NMR Refinement
Method	Details	Software
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.