2RNO

Solution Structure of the N-terminal SAP Domain of SUMO E3 Ligases from Oryza sativa


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT92% H2O/8% D2O6.1ambient283
23D 1H-15N NOESY0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT92% H2O/8% D2O6.1ambient283
33D HNCO0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT92% H2O/8% D2O6.1ambient283
43D HNCA0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT92% H2O/8% D2O6.1ambient283
53D CBCA(CO)NH0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT92% H2O/8% D2O6.1ambient283
63D 13C-edited 1H-15N NOESY0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT92% H2O/8% D2O6.1ambient283
72D 1H-13C HSQC0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT100% D2O6.1ambient283
83D HCCH-TOCSY0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT100% D2O6.1ambient283
94D 1H-13C NOESY0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT100% D2O6.1ambient283
103D HCABGCO0.7 mM [U-13C; U-15N] Siz1, 20 mM potassium phosphate, 300 mM sodium chloride, 2 mM DTT100% D2O6.1ambient283
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX750
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.1Bruker Biospin
2processingNMRPipereleased at Feb 10, 2006Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisTALOS2003.027.13.05Cornilescu, Delaglio and Bax
4peak pickingSparky3.113Goddard
5chemical shift assignmentSparky3.113Goddard
6peak pickingPIPP4.3.6Garrett
7chemical shift assignmentPIPP4.3.6Garrett
8structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
9refinementCYANA2.1Guntert, Mumenthaler, Wuthrich
10data analysisAQUA3.2Rullmann, Doreleijers and Kaptein
11data analysisProcheckNMR3.5.4Laskowski and MacArthur