2RIU

Alternative models for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase- alternate interpreation


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.1943.94

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 109.597α = 90
b = 47.9β = 70.62
c = 40.2γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH2003-07-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU2001.542

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.6651.7120361

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.751.71203611050930.1870.1850.215RANDOM13.836
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.850.330.85-0.21
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.63
r_dihedral_angle_3_deg13.904
r_dihedral_angle_4_deg9.066
r_dihedral_angle_1_deg5.412
r_scangle_it2.398
r_scbond_it1.448
r_angle_refined_deg1.129
r_mcangle_it0.764
r_mcbond_it0.468
r_nbtor_refined0.304
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.63
r_dihedral_angle_3_deg13.904
r_dihedral_angle_4_deg9.066
r_dihedral_angle_1_deg5.412
r_scangle_it2.398
r_scbond_it1.448
r_angle_refined_deg1.129
r_mcangle_it0.764
r_mcbond_it0.468
r_nbtor_refined0.304
r_symmetry_hbond_refined0.211
r_nbd_refined0.207
r_symmetry_vdw_refined0.124
r_xyhbond_nbd_refined0.115
r_chiral_restr0.075
r_bond_refined_d0.007
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1521
Nucleic Acid Atoms
Solvent Atoms151
Heterogen Atoms14

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction