2N1I

Structure of the PR domain from PRDM16

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.4-0.5 mM [U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
2	2D 1H-13C HSQC aliphatic	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
3	2D 1H-13C HSQC aromatic	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
4	3D HNCACB	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
5	3D CBCA(CO)NH	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
6	3D C(CO)NH	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
7	3D HNCO	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
8	3D HN(CA)CO	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
9	3D H(CCO)NH	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
10	3D HCCH-TOCSY	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
11	3D CCH-TOCSY	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
12	3D 1H-13C NOESY aliphatic	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
13	3D 1H-13C NOESY aromatic	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
14	2D HBCB(CGCD)HD	0.45-0.55 mM [U-99% 13C; U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
15	3D 1H-15N NOESY	0.4-0.5 mM [U-99% 15N] PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
16	2D DQF-COSY	0.5 mM PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298
17	2D 1H-1H TOCSY	0.5 mM PRDM16, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT	90% H2O/10% D2O	0.088	6.8	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	Varian NMR System	800
2	Varian	Varian NMR System	900
3	Varian	Varian NMR System	500

NMR Refinement
Method	Details	Software
molecular dynamics	Cartesian dynamics and Powell minimization in explicit water (default Aria refinement protocol)	VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ		Agilent
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	data analysis	CcpNmr		CCPN
5	chemical shift assignment	CcpNmr		CCPN
6	peak picking	CcpNmr		CCPN
7	structure solution	ARIA		Linge, O'Donoghue and Nilges
8	refinement	ARIA		Linge, O'Donoghue and Nilges
9	structure solution	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
10	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
11	generation of torsion angle restraints	TALOS		Cornilescu, Delaglio and Bax