2N03

Solution NMR Structure plectin repeat domain 6 (4403-4606) of Plectin from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR6354E


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
22D 1H-13C HSQC aliphatic1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
32D 1H-13C HSQC aromatic1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
43D TROSY-HNCO1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
53D TROSY-HNCA1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
63D TROSY-HN(CO)CA1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
73D TROSY-HNCACB1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
83D HMCM[CG]CBCA1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
93D HMCMCBCA1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
103D [H]-NOESY-[NH/CH] ( mix= 250 ms)1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
113D [(H)C]-NOESY-[CH], ( mix = 250 ms)1 mM [U-100% 13C; U-100% 15N; U-2H; ILV-1H] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
123D (H)CCH-COSY, aliphatic1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
133D (H)CCH-TOCSY, aliphatic1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
143D [H]-NOESY-[NH/CH] ( mix = 70 ms) #1 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
152D ct [13C,1H] HSQC (ct delay 28 ms)1 mM [U-5% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
162D ct [13C,1H] HSQC (ct delay 42 ms)1 mM [U-5% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
172D ct [13C,1H] HSQC (ct delay 56 ms)1 mM [U-5% 13C; U-100% 15N] protein, 20 mM MES, 100 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 mM NaN3, 50 uM DSS, 1 ratio protease inhibitor, 90/10 % H2O/D2O90% H2O/10% D2O1006.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA750
2VarianDDR2600
3BrukerAMX900
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, distance geometryAutoAssign
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisAutoAssignHuang, Tejero, Powers and Montelione
2structure solutionCYANAGuntert, Mumenthaler and Wuthrich
3dihedral anglesTALOSCornilescu, Delaglio and Bax
4refinementRosetta(rosetta) -baker david
5data analysisCARAKeller and Wuthrich
6data processingPROSAGuntert
7refinementCYANAGuntert, Mumenthaler and Wuthrich