2MS5
Structural dynamics of double-helical RNA having CAG motif
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D DQF-COSY | 2.35 mM RNA (5'-R(P*CP*CP*GP*CP*AP*GP*CP*GP*G)-3')-1 | 90% H2O/10% D2O | 0.018 | 7.2 | ambient | 308 | |
2 | 2D 1H-1H NOESY | 2.35 mM RNA (5'-R(P*CP*CP*GP*CP*AP*GP*CP*GP*G)-3')-1 | 90% H2O/10% D2O | 0.018 | 7.2 | ambient | 308 | |
3 | 2D 1H-1H TOCSY | 2.35 mM RNA (5'-R(P*CP*CP*GP*CP*AP*GP*CP*GP*G)-3')-1 | 90% H2O/10% D2O | 0.018 | 7.2 | ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 400 |
2 | Bruker | AVANCE | 700 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | Discover |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | Discover | Accelrys Software Inc. | |
2 | refinement | Discover |