2MRY

NMR solution structure of copper binding protein in the apo form

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
2	2D 1H-15N HSQC	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
3	3D CBCA(CO)NH	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
4	3D CBCANH	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
5	3D HNCO	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
6	3D C(CO)NH	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
7	3D H(CCO)NH	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
8	3D HCCH-TOCSY	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
9	3D HCCH-COSY	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
10	3D HNHA	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
11	3D 1H-15N NOESY	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298
12	3D 1H-13C NOESY	0.4-0.6 mM [U-98% 13C; U-98% 15N] copper binding protein, 10 % [U-99% 2H] D2O, 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM EDTA, 5 mM TCEP, 10 uM DSS, 0.02 % sodium azide	90% H2O/10% D2O	300	6	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Agilent	VNMRS	800
2	Agilent	VNMRS	600

NMR Refinement
Method	Details	Software
simulated annealing, torsion angle dynamics		CYANA

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	18
Representative Model	1 (fewest violations)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
2	peak picking	CcpNmr Analysis	2.3.0	CCPN
3	data analysis	CcpNmr Analysis	2.3.0	CCPN
4	chemical shift assignment	Sparky	2.6	Goddard
5	peak picking	Sparky	2.6	Goddard
6	processing	NMRPipe	8.1	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7	structure validation	PSVS	1.5	Bhattacharya and Montelione
8	chemical shift assignment	PINE	2.0	Bahrami, Markley, Assadi, and Eghbalnia
9	refinement	X-PLOR NIH	2.36	Schwieters, Kuszewski, Tjandra and Clore