2MPT

WW3 domain of Nedd4L in complex with its HECT domain PY motif


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.7 mM WW3-1, 1.4 mM HECT_PY-2, 150 mM sodium chloride-3, 20 mM sodium phosphate-490% H2O/10% D2O7ambient298
22D 1H-1H TOCSY0.7 mM WW3-1, 1.4 mM HECT_PY-2, 150 mM sodium chloride-3, 20 mM sodium phosphate-490% H2O/10% D2O7ambient298
33D 1H-15N NOESY1 mM [U-100% 15N] WW3-5, 2 mM HECT_PY-6, 150 mM sodium chloride-7, 20 mM sodium phosphate-890% H2O/10% D2O7ambient298
43D 1H-15N TOCSY1 mM [U-100% 15N] WW3-5, 2 mM HECT_PY-6, 150 mM sodium chloride-7, 20 mM sodium phosphate-890% H2O/10% D2O7ambient298
53D HNCACB0.8 mM [U-100% 13C; U-100% 15N] WW3-9, 1.6 mM HECT_PY-10, 150 mM sodium chloride-11, 20 mM sodium phosphate-1290% H2O/10% D2O7ambient298
63D CBCA(CO)NH0.8 mM [U-100% 13C; U-100% 15N] WW3-9, 1.6 mM HECT_PY-10, 150 mM sodium chloride-11, 20 mM sodium phosphate-1290% H2O/10% D2O7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingCNSSOLVE
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number300
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSSOLVEBrunger, Adams, Clore, Gros, Nilges and Read
2structure solutionCNSSOLVEBrunger, Adams, Clore, Gros, Nilges and Read
3chemical shift assignmentCARAKeller and Wuthrich
4peak pickingCARAKeller and Wuthrich
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6collectionTOPSPINBruker Biospin
7geometry optimizationTALOSCornilescu, Delaglio and Bax