2MPC
Solution structure of the pyrin domain of human Pyrin
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 | |
2 | 3D HNCO | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 | |
3 | 3D HN(CA)CO | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 | |
4 | 3D CBCA(CO)NH | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 | |
5 | 3D HNCACB | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 | |
6 | 3D C(CO)NH | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 | |
7 | 3D HBHA(CO)NH | 0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3 | 90% H2O/10% D2O | 150 | 4.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 750 |
2 | Bruker | AVANCE | 900 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | TopSpin |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 5000 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | processing | TopSpin | Bruker Biospin | |
3 | data analysis | TopSpin | Bruker Biospin | |
4 | refinement | CS-ROSETTA | 3.4 | YANG SHEN, OLIVER LANGE, FRANK DELAGLIO, ET AL. |