2MNH
Refined structure of outer membrane protein x in nanodisc by measuring residual dipolar couplings
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 0.5 mM [U-100% 13C; U-100% 15N] OUTER MEMBRANE PROTEIN X | 90% H2O/10% D2O | 100 | 7.4 | AMBIENT | 318 | |
2 | 3D HNCA | 0.5 mM [U-100% 13C; U-100% 15N] OUTER MEMBRANE PROTEIN X | 90% H2O/10% D2O | 100 | 7.4 | AMBIENT | 318 | |
3 | 2D 1H-15N HSQC | 0.5 mM [U-100% 13C; U-100% 15N] OUTER MEMBRANE PROTEIN X | 90% H2O/10% D2O | 100 | 7.4 | AMBIENT | 318 | |
4 | 2D 1H-15N COCAINE | 0.5 mM [U-100% 13C; U-100% 15N] OUTER MEMBRANE PROTEIN X | 90% H2O/10% D2O | 100 | 7.4 | AMBIENT | 318 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Avance | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | X-_PLOR_NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-_PLOR_NIH | SCHWIETERS, KUSZEWSKI, TJ | |
2 | structure solution | NMRPIPE | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
3 | structure solution | TOPSPIN | Bruker Biospin | |
4 | structure solution | SPARKY | Goddard |