2MKX

Solution structure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
2	3D HNCA	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
3	3D HN(CO)CA	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
4	3D HNCO	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
5	3D HN(CA)CO	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
6	3D HNCACB	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
7	3D CBCA(CO)NH	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
8	3D 1H-15N TOCSY	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
9	2D 1H-13C HSQC	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
10	3D HCCH-TOCSY	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
11	3D CCH-TOCSY	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
12	3D 1H-15N/13C NOESY aliphatic	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
13	2D 1H-13C HSQC aromatic	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298
14	2D H(N)CO	0.6 mM [U-100% 13C; U-100% 15N] lysm, 40 mM potassium phosphate	90% H2O/10% D2O	40	6.0	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	600

NMR Refinement
Method	Details	Software
simulated annealing	in explicit waters using ARIA protocol	Felix

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	Felix	2007	Accelrys Software Inc.
2	peak picking	Felix	2007	Accelrys Software Inc.
3	processing	Felix	2007	Accelrys Software Inc.
4	refinement	CNS	1.21	Brunger, Adams, Clore, Gros, Nilges and Read
5	structure solution	CNS	1.21	Brunger, Adams, Clore, Gros, Nilges and Read
6	collection	TopSpin	1.3	Bruker Biospin

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.