2M9X

Solution NMR Structure of Microtubule-associated serine/threonine-protein kinase 1 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR9151A


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
22D 1H-13C CT HSQC aliphatic0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
33D HNCO0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
43D CBCA(CO)NH0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
53D HNCACB0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
62D 1H-13C CT HSQC aromatic0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
73D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
83D HCCH-TOCSY0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
93D HBHA(CO)NH0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
103D HN(CA)CO0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
112D 1H-15N HSQC_wide0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
123D (H)CCH-COSYali0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
133D (H)CCH-COSYaro0.508 mM [U-100% 13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
142D 1H-13C HSQC methyl0.39 mM [%5-13C; U-100% 15N] HR9151A.011, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 50 uM DSS90% H2O/10% D2O7.5ambient283
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA750
NMR Refinement
MethodDetailsSoftware
simulated annealingStructure was calculated by running CYANA and ASDP in parallel using NOE-based constraints and phi and psi dihedral angle constraints derived from Talos+. Consensus peak assignments were selected and used in iterative refinement with CYANA. The 20 conformers out of 100 with the lowest target function were further refined by simulated annealing in explicit water bath using the program CNS with PARAM19 force field.CNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNS1.3Brunger, Adams, Clore, Gros, Nilges and Read
2structure solutionCNS1.3Brunger, Adams, Clore, Gros, Nilges and Read
3geometry optimizationCNS1.3Brunger, Adams, Clore, Gros, Nilges and Read
4refinementCYANA3.0Guntert, Mumenthaler and Wuthrich
5geometry optimizationCYANA3.0Guntert, Mumenthaler and Wuthrich
6structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
7data analysisAutoStructure2.1Huang, Tejero, Powers and Montelione
8refinementAutoStructure2.1Huang, Tejero, Powers and Montelione
9data analysisAutoAssign2.3.1Zimmerman, Moseley, Kulikowski and Montelione
10chemical shift assignmentAutoAssign2.3.1Zimmerman, Moseley, Kulikowski and Montelione
11data analysisXEASYBartels et al.
12peak pickingXEASYBartels et al.
13chemical shift assignmentXEASYBartels et al.
14collectionVnmrJ2.2DVarian
15geometry optimizationTALOS+Shen, Cornilescu, Delaglio and Bax
16structure validationPSVS1.4Bhattacharya, Montelione
17data analysisCARA1.8.4Keller and Wuthrich
18peak pickingCARA1.8.4Keller and Wuthrich
19chemical shift assignmentCARA1.8.4Keller and Wuthrich
20processingPROSAGuntert
21data analysisCSIWishart and Sykes