2LX4

NMR solution structure of peptide a2N(1-17) from Mus musculus V-ATPase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY2 mM a2N(1-17), 50 % [U-99% 2H] TFE, 25 mM sodium phosphate, 300 mM sodium chloridetrifluoroethanol/water6.5ambient298
22D 1H-1H NOESY2 mM a2N(1-17), 50 % [U-99% 2H] TFE, 25 mM sodium phosphate, 300 mM sodium chloridetrifluoroethanol/water6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
NMR Refinement
MethodDetailsSoftware
simulated annealingTOPSPIN
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTOPSPIN2.1Bruker Biospin
2processingTOPSPIN2.1Bruker Biospin
3chemical shift assignmentSPARKYGoddard
4chemical shift calculationSPARKYGoddard
5peak pickingSPARKYGoddard
6data analysisSPARKYGoddard
7geometry optimizationTALOSCornilescu, Delaglio and Bax
8structure solutionCYANAGuntert, Mumenthaler and Wuthrich
9refinementCYANAGuntert, Mumenthaler and Wuthrich