2LTU

Solution Structure of autoinhibitory domain of human AMP-activated protein kinase catalytic subunit


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
22D 1H-13C HSQC0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
33D CBCA(CO)NH0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
43D HNCACB0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
53D HNCA0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
63D HN(CO)CA0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
73D HNCO0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
83D HCACO0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
93D H(CCO)NH0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
103D HCCH-TOCSY0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
113D HBHA(CO)NH0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
123D 1H-15N TOCSY0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
133D 1H-15N NOESY0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
143D 1H-13C NOESY0.2 mM [U-100% 13C; U-100% 15N] AID protein, 50 mM sodium phosphate, 10 % [U-100% 2H] D2O, 90 % H2O, 1 mM EDTA90% H2O/10% D2O507.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
NMR Refinement
MethodDetailsSoftware
simulated annealingNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2peak pickingNMRViewJohnson, One Moon Scientific
3collectionTOPSPINBruker Biospin
4data analysisNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5structure solutionCYANAGuntert, Mumenthaler and Wuthrich
6structure solutionDYANAGuntert, Braun and Wuthrich
7refinementAMBERCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
8geometry optimizationProcheckNMRLaskowski and MacArthur